生物信息学/R语言在生物信息学的应用
< 生物信息学
生信分析相关的R包
编辑reshape:长短数据转换
编辑reshape:http://had.co.nz/reshape/
https://cran.r-project.org/web/packages/reshape2/index.html
ggvis可视化:https://ggvis.rstudio.com/
shiny类
编辑shiny的UI进阶设计:https://unleash-shiny.rinterface.com/
shiny和SQL数据库:https://bookdown.org/msharkey3434/ShinyDB_Book/
R, plotly, shinyR, plotly和shiny:https://plotly-r.com/
相关书籍/资料
编辑数据分析残卷:https://bookdown.org/yufree/datadown/
bookdown:https://bookdown.org/
http://cran.r-project.org/doc/contrib/Short-refcard.pdf
RStudio Cheatsheets:https://www.rstudio.com/resources/cheatsheets/
R函数在线参考文档:https://rdrr.io/
- Statistical tools for high-throughput data analysis:http://www.sthda.com/english/
- R语言与统计生物信息学:
- R Bioinformatics Cookbook,使用 R 和 Bioconductor 执行 RNAseq、基因组学、数据可视化和生物信息学分析:https://www.packtpub.com/product/r-bioinformatics-cookbook/9781789950694
免费视频课程
编辑Bioconductor
编辑- Bioconductor课程:http://www.bioconductor.org/help/course-materials/
- 斯坦福的Bioconductor课程:https://web.stanford.edu/class/bios221/about.html
- Biostars的R专题:https://www.biostars.org/t/R/
- R编程:https://www.youtube.com/c/RProgrammingDDS
- 【生信技能树】生信人应该这样学R语言:https://www.bilibili.com/video/av25643438
- 【生信技能树】公共数据库挖掘实例(基于R语言):https://www.bilibili.com/video/av37568990
- R语言入门生信应用基础课程:https://study.163.com/course/courseMain.htm?courseId=1209044861
- R语言入门数据分析:https://ke.qq.com/course/366588
- 生物信息学入门基础讲座的R部分:https://ke.qq.com/course/270841
- PlottinginRforBiologists:https://marianattestad.com/blog